Publication

Dias GB, Svartman M, Delprat A, Ruiz A, Kuhn GC
Genome biology and evolution (Volume: 6; Issue: 6)
2014 May 27
PubMed: 248585...  | PMC: PMC40792...  | DOI: 10.1093/... 

Participating groups

Drosophila Evolutionary Genetics

Members

Abstract

Transposable elements (TEs) and satellite DNAs (satDNAs) are abundant components of most eukaryotic genomes studied so far and their impact on evolution has been the focus of several studies. A number of studies linked TEs with satDNAs, but the nature of their evolutionary relationships remains unclear. During in silico analyses of the Drosophila virilis assembled genome, we found a novel DNA transposon we named Tetris based on its modular structure and diversity of rearranged forms. We aimed to characterize Tetris and investigate its role in generating satDNAs. Data mining and sequence analysis showed that Tetris is apparently nonautonomous, with a structure similar to foldback elements, and present in D. virilis and D. americana. Herein, we show that Tetris shares the final portions of i...